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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831737.1_cds_XP_016504648.1_18063
CDS Infomation

[gene=LOC107822620] [db_xref=GeneID:107822620] [protein=pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like isoform X2] [protein_id=XP_016504648.1] [location=complement(join(43498..43538,43808..44822))] [gbkey=CDS]
Sequence

ATGCTCACTCTGCGCCTGGTTCGCAGATTTGGAACTGCGAGTCACATTGCTGCTGCCACG
GCTATTGCATCCTCAGGTGTTGCTGGTAAGAATTCCAGTAAAGGTTTAGTATCTAGGAAA
AAGCCTTTAAAAGTAGATGAGCCTGCACTTATAAAGCTAAAAAAGGAAAGGAACCCTGAG
AAGTTGTTTCAGTTATTTAAGGAGAATGCTCATAATAAGGTTGTTGTTGAGAACCGCTTT
GTGTTTGAAGACACAGTTTCTCGCTTAGCAGGTGCGGGCAGGTTTGATTATATTGAAAAT
CTTCTTGAGCATCAGAAGACTCTTCCGCAAGGTCGGCGTGAAGGTTTCATTATTCGGCTT
ATAATGCTTTATGGGAAGGCTGGGATGACGCAGCATGCTGTAAATACCTTCTATGACATG
CATTTATATGGTTGTCCGCGGACTGTTAAGTCATTCAACGCTGCACTCAAGGTTTTGACT
CAATCTCGTGATTTGAAGGCGATTGAGTCGTTCCTGTGGGATGTTCCTGAGAAGTTCTCC
ATCAATATAGATATACTTTCAGTAAATACAGTCATTAGCTCATTTTGTGAAATGGGTATC
TTGGAGAAGGCTTATTTGGTCATGGTTGAGATGGAAAAGTTAGGTATAACGCCTGATGTT
TTTACATATACGACACTTATATATGCCTTCTATAAAGTCAACAGATGGCAGATTGGTGAT
GGATTGTGGAACCTCATGGTCGGTAAGGGATGTATGCCTAATGTTGCTACCTTTAACGTT
AGAATTCAATTCTTAGTAAATGTGGGGCTTGCTTGGGAAGCTAATAAATTGTTGCTGTTG
ATGAAACGTATTGGGATAACTCCTGATGAGGTTACATACAATTTAGTGATCAAAGGCTTT
TGCCGAGCAGAGAATCTTGATATGGCAAAAAGAATCTATTCTGCTTTATGTGGTGCAGGC
TTCAATCCAAATGCTAAAATCTATCAGACCATGATTCATTACCTGTCTAGAGCGGCAAAT
TGTATAATCCGCAAAGCTCCATTCTCTTTTTGGTGA

Peptide Sequence

PEP ID

XP_016504648.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MLTLRLVRRFGTASHIAAATAIASSGVAGKNSSKGLVSRKKPLKVDEPALIKLKKERNPE
KLFQLFKENAHNKVVVENRFVFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGFIIRL
IMLYGKAGMTQHAVNTFYDMHLYGCPRTVKSFNAALKVLTQSRDLKAIESFLWDVPEKFS
INIDILSVNTVISSFCEMGILEKAYLVMVEMEKLGITPDVFTYTTLIYAFYKVNRWQIGD
GLWNLMVGKGCMPNVATFNVRIQFLVNVGLAWEANKLLLLMKRIGITPDEVTYNLVIKGF
CRAENLDMAKRIYSALCGAGFNPNAKIYQTMIHYLSRAANCIIRKAPFSFW

Transcript Sequence

Gene sequence data has not been registered.